This sequence `soleil2016/GGHL_rDGL_SGF55_lambda_Em_cinsuite_1/Pos0` needs to be processed for the article so I wanted to describe why the preprocessing doesn't give ideal results on it and how to improve it.
- the detection is not great at the moment (15 globules detected amongst the 50), because:
1. the parameters are probably not optimal
2. the mask used is incomplete
3. some particules are very difficult to detect anyway
- added documentation
- still need some more work:
1 output the radius of detected particles
2. analyse why detection is not optimal
3. handle weights w_r and w_a
4. filter out radial profiles that are not expected
5. improve the computation of the peakness s_p
v1.02
This was primarily done to detect bad restructuredtext syntax in python code.
This allowed me to detect and fix quite a few errors. In order to fix the orrors in the output document, I also added quite a lot of docstrings, as sphinx autodoc ignores classes and functions that don't have docstrings.
This was my first experience with sphinx but I'm not quite happy with it, as it requires too much verbose and time consuming helps and hinting to produce something decent. Moreobver, it suffers from a lack of examples for non basic usage, such as :
- how to expose to the user the __item__ methods
- how to document multiple return values
- etc.
Guillaume Raffy
Guillaume Raffy