Update Activity 7

msspecbook/Activity07/Activity07.ipynb

@@ -10,12 +10,22 @@
    ]
   },
   {
-   "cell_type": "code",
+   "cell_type": "markdown",
-   "execution_count": null,
+   "id": "2f802e59-3ebc-4c5d-a034-42a706044d87",
-   "id": "e0df9191-52b9-4a42-9232-7fed2b63cc3a",
+   "metadata": {
-   "metadata": {},
+    "editable": true,
-   "outputs": [],
+    "slideshow": {
-   "source": []
+     "slide_type": ""
+    },
+    "tags": []
+   },
+   "source": [
+    ":::{figure-md} filters-fig\n",
+    "<img src=\"filters.jpg\" alt=\"path filtering\" width=\"600px\" align=\"center\">\n",
+    "\n",
+    "Some examples of scattering paths with `forward_scattering`, `backward_scattering` and `distance` filters selected. The accepted forward angle is 45°, the accepted backscattering angle is 20° and the threshold distance is $6a_0$ where $a_0$ is the lattice parameter. Note that the yellow path is rejected but if the `off_cone_events` option is set to a value > 1, then it could have been accepted.\n",
+    ":::"
+   ]
   }
  ],
  "metadata": {

msspecbook/_build/html/Activity07/Activity07.html

@@ -32,7 +32,7 @@
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+    <link rel="stylesheet" type="text/css" href="../_static/mystnb.4510f1fc1dee50b3e5859aac5469c37c29e427902b24a333a5f9fcb2f0b3ac41.css?v=be8a1c11" />
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@@ -57,6 +57,8 @@
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+    <script>window.MathJax = {"options": {"processHtmlClass": "tex2jax_process|mathjax_process|math|output_area"}}</script>
+    <script defer="defer" src="https://cdn.jsdelivr.net/npm/mathjax@3/es5/tex-mml-chtml.js"></script>
     <script>DOCUMENTATION_OPTIONS.pagename = 'Activity07/Activity07';</script>
     <link rel="index" title="Index" href="../genindex.html" />
     <link rel="search" title="Search" href="../search.html" />
@@ -344,6 +346,13 @@ document.write(`
                   
   <section class="tex2jax_ignore mathjax_ignore" id="activity-7-large-clusters-and-path-filtering">
 <span id="path-filtering"></span><h1>Activity 7: Large clusters and path filtering<a class="headerlink" href="#activity-7-large-clusters-and-path-filtering" title="Link to this heading">#</a></h1>
+<figure class="align-default" id="filters-fig">
+<a class="reference internal image-reference" href="../_images/filters.jpg"><img alt="path filtering" class="align-center" src="../_images/filters.jpg" style="width: 600px;" />
+</a>
+<figcaption>
+<p><span class="caption-number">Fig. 16 </span><span class="caption-text">Some examples of scattering paths with <code class="docutils literal notranslate"><span class="pre">forward_scattering</span></code>, <code class="docutils literal notranslate"><span class="pre">backward_scattering</span></code> and <code class="docutils literal notranslate"><span class="pre">distance</span></code> filters selected. The accepted forward angle is 45°, the accepted backscattering angle is 20° and the threshold distance is <span class="math notranslate nohighlight">\(6a_0\)</span> where <span class="math notranslate nohighlight">\(a_0\)</span> is the lattice parameter. Note that the yellow path is rejected but if the <code class="docutils literal notranslate"><span class="pre">off_cone_events</span></code> option is set to a value &gt; 1, then it could have been accepted.</span><a class="headerlink" href="#filters-fig" title="Link to this image">#</a></p>
+</figcaption>
+</figure>
 </section>
 
     <script type="text/x-thebe-config">

msspecbook/_build/html/_sources/Activity07/Activity07.ipynb

@@ -10,12 +10,22 @@
    ]
   },
   {
-   "cell_type": "code",
+   "cell_type": "markdown",
-   "execution_count": null,
+   "id": "2f802e59-3ebc-4c5d-a034-42a706044d87",
-   "id": "e0df9191-52b9-4a42-9232-7fed2b63cc3a",
+   "metadata": {
-   "metadata": {},
+    "editable": true,
-   "outputs": [],
+    "slideshow": {
-   "source": []
+     "slide_type": ""
+    },
+    "tags": []
+   },
+   "source": [
+    ":::{figure-md} filters-fig\n",
+    "<img src=\"filters.jpg\" alt=\"path filtering\" width=\"600px\" align=\"center\">\n",
+    "\n",
+    "Some examples of scattering paths with `forward_scattering`, `backward_scattering` and `distance` filters selected. The accepted forward angle is 45°, the accepted backscattering angle is 20° and the threshold distance is $6a_0$ where $a_0$ is the lattice parameter. Note that the yellow path is rejected but if the `off_cone_events` option is set to a value > 1, then it could have been accepted.\n",
+    ":::"
+   ]
   }
  ],
  "metadata": {

msspecbook/_build/html/genindex.html

@@ -31,7 +31,7 @@
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msspecbook/_build/html/intro.html

@@ -32,7 +32,7 @@
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     <link rel="stylesheet" type="text/css" href="_static/copybutton.css?v=76b2166b" />
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+    <link rel="stylesheet" type="text/css" href="_static/mystnb.4510f1fc1dee50b3e5859aac5469c37c29e427902b24a333a5f9fcb2f0b3ac41.css?v=be8a1c11" />
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msspecbook/_build/html/search.html

@@ -30,7 +30,7 @@
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     <link rel="stylesheet" type="text/css" href="_static/copybutton.css?v=76b2166b" />
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+    <link rel="stylesheet" type="text/css" href="_static/mystnb.4510f1fc1dee50b3e5859aac5469c37c29e427902b24a333a5f9fcb2f0b3ac41.css?v=be8a1c11" />
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msspecbook/_build/jupyter_execute/Activity07/Activity07.ipynb

@@ -10,12 +10,22 @@
    ]
   },
   {
-   "cell_type": "code",
+   "cell_type": "markdown",
-   "execution_count": null,
+   "id": "2f802e59-3ebc-4c5d-a034-42a706044d87",
-   "id": "e0df9191-52b9-4a42-9232-7fed2b63cc3a",
+   "metadata": {
-   "metadata": {},
+    "editable": true,
-   "outputs": [],
+    "slideshow": {
-   "source": []
+     "slide_type": ""
+    },
+    "tags": []
+   },
+   "source": [
+    ":::{figure-md} filters-fig\n",
+    "<img src=\"filters.jpg\" alt=\"path filtering\" width=\"600px\" align=\"center\">\n",
+    "\n",
+    "Some examples of scattering paths with `forward_scattering`, `backward_scattering` and `distance` filters selected. The accepted forward angle is 45°, the accepted backscattering angle is 20° and the threshold distance is $6a_0$ where $a_0$ is the lattice parameter. Note that the yellow path is rejected but if the `off_cone_events` option is set to a value > 1, then it could have been accepted.\n",
+    ":::"
+   ]
   }
  ],
  "metadata": {