24 lines
1.0 KiB
Bash
Executable File
24 lines
1.0 KiB
Bash
Executable File
#!/bin/bash
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FIJI_EXE_PATH=''
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RAW_IMAGES_ROOT_PATH=''
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LIPASE_SRC_ROOT_PATH="$(pwd)/src"
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case "$(uname)" in
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'Linux')
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FIJI_EXE_PATH='./Fiji.app/ImageJ-linux64'
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RAW_IMAGES_ROOT_PATH='/opt/ipr/cluster/work.global/graffy/jenkins-store/lipase/raw-images'
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;;
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'Darwin')
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FIJI_EXE_PATH='/Applications/Fiji.app/Contents/MacOS/ImageJ-macosx'
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RAW_IMAGES_ROOT_PATH='/Users/graffy/work/lipase/raw-images'
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;;
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*)
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echo "unhandled operating system : $(uname)"
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exit 1
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esac
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"$FIJI_EXE_PATH" --ij2 --headless --run './tests/test0001.py' "raw_images_root_path='$RAW_IMAGES_ROOT_PATH'"
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# on macosx : /Applications/Fiji.app/Contents/MacOS/ImageJ-macosx --ij2 --headless --run './test0001.py'
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# /Applications/Fiji.app/Contents/MacOS/ImageJ-macosx --ij2 --headless --run './tests/test0001.py' "lipase_src_root_path='$(pwd)',raw_images_root_path='/Users/graffy/ownCloud/ipr/lipase/raw-images'"
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ERROR_CODE=$?
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echo "Fiji 's return code : $ERROR_CODE"
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ERROR_CODE=$(cat '/tmp/test_result.txt')
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exit $ERROR_CODE |