Commit Graph

56 Commits

Author SHA1 Message Date
Guillaume Raffy 228ae4ab54 fixed errors detected by pylint 2019-09-18 12:34:52 +02:00
Guillaume Raffy d973c0e1cd now the _remove_particles method is complete
added an average filter so that it is now equivalent to the matlab code it's based on.
2019-09-18 12:06:18 +02:00
Guillaume Raffy 1fd2fc4281 Now the grayscale morphology in estimate_white is performed in a reasonable time.
The performance improvement is obtained by using opencv's gray morphology operators instad of imagej's
2019-09-18 10:23:21 +02:00
Guillaume Raffy 74d7f9e603 finished abstracting image processing engine
all imagej related code has now been moved to ijimageengine.py
2019-09-16 16:31:33 +02:00
Guillaume Raffy 7994afd01a started the abstraction of the image processing engine so that the lipase image processing can be executed without imagej if it's deemed to slow in the end. 2019-09-16 15:53:27 +02:00
Guillaume Raffy b7b1f81fa7 improved source code layout 2019-09-16 11:54:13 +02:00