Guillaume Raffy
e9e0ac3a6c
now jenkins sends an e-mail to guillaume raffy when the validation fails
2022-03-16 10:48:54 +01:00
2891b02d4e
and another attempt...
2020-04-10 17:53:01 +02:00
85def10051
another attempt...
2020-04-10 17:50:45 +02:00
543da2e735
still fixing relasing of packages...
2020-04-10 17:38:54 +02:00
b9f18bfb46
fix to package release (hopefully) that I broke in revent commits
2020-04-10 17:34:13 +02:00
81c0e91897
hope that the syntax for BUILD_ROOT_PATH is right this time
2020-04-10 16:41:37 +02:00
c24cb10899
fix (hopefully) jenkins syntax with BUILD_ROOT_PATH
2020-04-10 15:24:40 +02:00
595fc09571
moved the build files outside the repository
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In order to prevent pollution of repository with temporary files, the build files can now be where the user wants via BUILD_ROOT_PATH makefile variable.
2020-04-10 15:14:33 +02:00
13eb92c76e
allows the user to choose the location of the tests output data
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This prevents pollution of git repository with temporary files and is done via a makefile variable TESTS_OUTPUT_DATA_PATH.
2020-04-10 13:26:05 +02:00
f4aa0423ac
added doc generation in jenkins continuous integration
2020-03-18 16:42:14 +01:00
a64eed47da
removed unused code
2020-01-29 12:13:16 +01:00
8c3a5b0d72
lipase is now released as a package on an owncloud directory
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This will ease the deployment to users.
2019-10-04 18:48:35 +02:00
61f6d9aeba
cleanup ununsed files and comments
2019-10-04 12:27:25 +02:00
ad07463c64
fixes to continuous integration
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1. I forgot to specify fiji and raw data locations in jenkinsfile
2. the absence of fiji wasn't detected by the test
2019-10-04 11:47:34 +02:00
34fc0aca26
Replaced bash scripts with makefile.
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The resulting system is clearer and more generic (easier to change location of fiji or root images, as it is now located in one single place : the makefile). Some actions such as the installation of fiji are left as scripts outside the makefile.
2019-10-04 11:36:53 +02:00
Guillaume Raffy
78c8749aba
now jenkins build is no longer affected by a previous broken build
2019-10-01 12:45:22 +02:00
Guillaume Raffy
696d02757a
fixed bug in jenkins file (fiji location)
2019-09-30 16:04:30 +02:00
Guillaume Raffy
3f534229fd
added install of ij-opencv-plugins in fiji, as lipase uses them
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the test of lipase can't currently succeed (it actually fails but the error is not currently detected) because lipase requires opencv.
2019-09-30 15:39:38 +02:00
Guillaume Raffy
04e46b27dd
started to translate matlab telemosToolbox's preprocessing functions into jython so that they can benefit from fiji framework
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- started to write estimate_white, with its unit test
- refactor: split lipase.py into modules
- cleanup : removed unused files and unused jenkins steps
- improved jenkinsfile
Bug 2623 - Faire un traitement automatique pour les images du projet lipase
2019-07-17 16:56:05 +02:00
Guillaume Raffy
de1e837d60
added image proc test in continuous integration
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this test (which runes fiji image processing) will help detect
regressions.
2019-04-08 19:18:45 +02:00
Guillaume Raffy
87923e96d9
now that we have the physix agent, we use it to build lipase, as it's more appropriate.
2019-03-21 15:44:17 +01:00
Guillaume Raffy
430e7b0c2f
as master agent fails (missing g++ compiler), made lipase buid use msspec_agent_amd64 as before
2019-03-20 15:54:49 +01:00
Guillaume Raffy
6e6ea63658
configured the jenkins file to use the agent 'master' to see if it works
2019-03-20 15:33:43 +01:00
Guillaume Raffy
01fee2f3b2
fixed bug in shell commands
2019-03-07 11:43:41 +01:00
Guillaume Raffy
cdc261f701
fixed comments
2019-03-07 11:33:59 +01:00
Guillaume Raffy
5166363522
added basic jenkins file to automate the build of hello
2019-03-07 10:56:01 +01:00
Guillaume Raffy
Guillaume Raffy