// This file is part of BUDEES, a software that allows fast simulation of bubble dynamics in electrolyzers and their interactions with electrical parameters. 
// 
// Copyright (C) 2024 <CNRS-ENS Rennes-Université de Rennes-CY Cergy Paris Université-Université Paris Saclay-CNAM Paris-ENS Paris-Saclay>
// 
// This program is free software: you can redistribute it and/or modify
// it under the terms of the GNU General Public License as published by
// the Free Software Foundation, either version 3 of the License, or
// (at your option) any later version.
// 
// This program is distributed in the hope that it will be useful,
// but WITHOUT ANY WARRANTY; without even the implied warranty of
// MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
// GNU General Public License for more details.
// 
// You should have received a copy of the GNU General Public License along with this program. If not, see https://www.gnu.org/licenses/

void readConfigurationTopology(Configuration& configuration, Topology& topology, double* args) {
	int pos = 0, count;
	/* -------- Parameters -------- */
	// System dimensions [m]
	configuration.L[0] = args[pos++];
	configuration.L[1] = args[pos++];
	// Current density [A/m2]
	configuration.J = args[pos++];
	// Simulation duration [s]
	configuration.tf = args[pos++];
	/* --------- Topology --------- */
	// Polygon count
	topology.polygonCount[0] = args[pos++];
	topology.polygonCount[1] = args[pos++];
	// Polygon indexs
	count = topology.polygonCount[0]+1;
	topology.polygonIndex[0] = new int[count];
	for (int i = 0; i < count; i++) {
		topology.polygonIndex[0][i] = args[pos++];
	}
	count = topology.polygonCount[1]+1;
	topology.polygonIndex[1] = new int[count];
	for (int i = 0; i < count; i++) {
		topology.polygonIndex[1][i] = args[pos++];
	}
	// Polygon defs
	count = topology.polygonIndex[1][topology.polygonCount[1]];
	topology.polygonDefinitions = new Point[count];
	for (int i = 0; i < count; i++) {
		topology.polygonDefinitions[i] = {args[pos++], args[pos++]};
	}
}