Application to a deep plane in a Si(001) sample
The following script will compute contribution of all the planes of a Si(001) substrate to get the total photoelectron intensity of a Si(2s) polar scan.
+
diff --git a/msspecbook/_build/html/_sources/Activity07/Activity07.ipynb b/msspecbook/_build/html/_sources/Activity07/Activity07.ipynb
index ee11a68..9f612ce 100644
--- a/msspecbook/_build/html/_sources/Activity07/Activity07.ipynb
+++ b/msspecbook/_build/html/_sources/Activity07/Activity07.ipynb
@@ -115,6 +115,13 @@
"\n",
"The following script will compute contribution of all the planes of a Si(001) substrate to get the total photoelectron intensity of a Si(2s) polar scan. \n",
"\n",
+ "(msd-paper)=\n",
+ ":::{seealso}\n",
+ "based on this paper from S. Tricot *et al.*\n",
+ "[J. Electron. Spectrosc. Relat. Phenom. **256** 147176 (2022)](https://doi.org/10.1016/j.elspec.2022.147176)\n",
+ ":::\n",
+ "\n",
+ "\n",
"::::{tab-set}\n",
"\n",
":::{tab-item} 2 surface": [[4, "ped-of-the-1t-tise2-surface"]], "PED polar scan for Cu(001)": [[0, "ped-polar-scan-for-cu-001"]], "Paths filtering in MsSpec": [[6, "paths-filtering-in-msspec"]], "Sb-induced smooth growth of Ag on Ag(111) example": [[1, "sb-induced-smooth-growth-of-ag-on-ag-111-example"]], "Shaping a cluster": [[0, "shaping-a-cluster"]], "Surface and bulk effects of the temperature": [[5, "surface-and-bulk-effects-of-the-temperature"]], "The number of scattering paths": [[6, "the-number-of-scattering-paths"]], "The script": [[5, "the-script"]], "Welcome to this small MsSpec tour": [[12, null]]}, "docnames": ["Activity01/Activity01", "Activity02/Activity02", "Activity03/Activity03", "Activity04/Activity04", "Activity05/Activity05", "Activity06/Activity06", "Activity07/Activity07", "Activity08/Activity08", "Activity09/Activity09", "Activity10/Activity10", "Activity11/Activity11", "backmatter", "intro"], "envversion": {"sphinx": 62, "sphinx.domains.c": 3, 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"without": [0, 6], "word": 12, "work": [0, 5], "would": [1, 4, 6], "written": 0, "x": [1, 3, 5], "x_alpha_r": 5, "xlabel": 5, "xpd": [4, 12], "xraysourc": 5, "xu": 3, "y": [1, 3], "year": [], "yellow": 6, "ylabel": 5, "ylim": 3, "you": [0, 1, 2, 3, 4, 5, 6, 12], "your": [1, 2, 3, 5], "z": [1, 2, 3, 4], "z0": 2, "z_0": 2, "zi": 2, "zip": [], "\u00b5": 6, "\u00e5": [2, 4, 6]}, "titles": ["Activity 1: Getting started", "Activity 2: Setting up the \u201cexperiment\u201d", "Activity 3: Adsorbates and the single scattering approach", "Activity 4: From single scattering to multiple scattering", "Activity 5: Multiple scattering in the forward scattering regime", "Activity 6: Effect of the temperature", "Activity 7: Large clusters and path filtering", "Activity 8: Inequivalent emitters and the XPD of a substrate", "Activity 9: Comparing simulation and experiment with R-factors", "Activity 10: Auger Electron Diffraction", "Activity 11: Spectral radius and convergence", "Final word", "Welcome to this small MsSpec tour"], "titleterms": {"001": [0, 2, 6], "1": 0, "10": 9, "11": 10, "111": 1, "1t": 4, "2": [1, 4], "3": 2, "4": 3, "5": 4, "6": 5, "7": 6, "8": 7, "9": 8, "The": [5, 6], "activ": [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10], "adsorb": 2, "ag": 1, "an": 1, "applic": 6, "approach": 2, "atom": 0, "auger": 9, "azimuth": 1, "backscatt": 2, "barebon": 0, "build": [0, 1], "bulk": 5, "cluster": [0, 1, 4, 6], "compar": 8, "comput": [1, 2], "converg": 10, "creat": 4, "cu": 0, "deep": 6, "developp": 11, "diffract": 9, "due": 2, "effect": [4, 5], "electron": 9, "emitt": 7, "exampl": 1, "experi": [1, 8], "factor": [2, 8], "filter": 6, "final": 11, "forward": 4, "from": 3, "futur": 11, "get": 0, "growth": 1, "how": 11, "induc": 1, "inequival": 7, "instal": 11, "interfer": 2, "larg": 6, "msspec": [0, 6, 11, 12], "multipl": [3, 4], "number": 6, "order": 4, "our": 11, "oxygen": 2, "path": 6, "ped": [0, 4], "plane": 6, "polar": 0, "r": 8, "radiu": 10, "regim": 4, "rh": 2, "sampl": 6, "sb": 1, "scan": [0, 1], "scatter": [2, 3, 4, 6], "script": [0, 5], "set": 1, "shape": 0, "si": 6, "simul": 8, "singl": [2, 3], "small": 12, "smooth": 1, "spectral": 10, "start": 0, "sub": 4, "substrat": 7, "surfac": [4, 5], "system": 0, "temperatur": 5, "thi": 12, "tise": 4, "tise2": 4, "tour": 12, "up": 1, "welcom": 12, "word": 11, "work": 11, "xpd": 7}})
\ No newline at end of file
diff --git a/msspecbook/_build/jupyter_execute/Activity07/Activity07.ipynb b/msspecbook/_build/jupyter_execute/Activity07/Activity07.ipynb
index 5f7137e..c80e6c1 100644
--- a/msspecbook/_build/jupyter_execute/Activity07/Activity07.ipynb
+++ b/msspecbook/_build/jupyter_execute/Activity07/Activity07.ipynb
@@ -115,6 +115,13 @@
"\n",
"The following script will compute contribution of all the planes of a Si(001) substrate to get the total photoelectron intensity of a Si(2s) polar scan. \n",
"\n",
+ "(msd-paper)=\n",
+ ":::{seealso}\n",
+ "based on this paper from S. Tricot *et al.*\n",
+ "[J. Electron. Spectrosc. Relat. Phenom. **256** 147176 (2022)](https://doi.org/10.1016/j.elspec.2022.147176)\n",
+ ":::\n",
+ "\n",
+ "\n",
"::::{tab-set}\n",
"\n",
":::{tab-item}